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These easy Carrot Cake Cupcakes are moist, tender, infused with the perfect amount of spices, and topped with a sweet cinnamon-cream cheese frosting. Add a sprinkle of pecans for the perfect finishing touch!

Carrot Cake Cupcakes on a cake stand

Carrot Cake Cupcakes

These Carrot Cake Cupcakes are one of my family’s favorite treats and everyone that tries these goes crazy for them! My dad’s all-time favorite dessert is Carrot Cake and after spending literally years perfecting my carrot cake recipe, I thought I’d tweak it a bit to create some perfectly moist, tender, and flavorful cupcakes.

All in the name of “testing,” we’ve made these cupcakes more times than I can count the last couple of months. My toddler alternates asking for these or Carrot Cake every single Sunday when we bake a treat together. As much as I love that cake, these cupcakes are easier to make (especially with four little hands adding ingredients quicker than I can monitor!).

Carrot Cake Cupcakes Taste

So what can you expect taste-wise from these cupcakes? 

These classic Carrot Cake Cupcakes are moist, tender, and soft. They’re spiced with cinnamon, ginger, nutmeg, and cloves — none of which are overpowering but work together subtly to create a deep, rich flavor. This cupcake recipe emphasizes brown sugar over white– which further intensifies those deep notes of spice. The brown sugar also contributes to a more moist and tender cupcake.

These cupcakes are topped with a luscious and sweet cream cheese frosting that has a hint of cinnamon spice. The slight tang of the frosting helps to balance the sweetness of the cupcakes.

Process shots-- images of the wet and dry ingredients being prepped in seperate bowls

How to make Carrot Cake Cupcakes from scratch

My top tips for success in making these homemade cupcakes:

  • Start with room-temperature ingredients. It’s important for the final texture of these cupcakes that all of your ingredients are at room temperature. Using room-temperature eggs ensures that the eggs disperse more evenly into the batter; that gives these cupcakes a lighter texture (the eggs trap air). Soaking refrigerated eggs in a bowl of warm (not hot) water for about 10 minutes is a quick way to do this. Otherwise, pull the eggs out of the refrigerator about 30 minutes before use.  (You’ll also want the applesauce and carrots at room temperature.)
  • When you measure the flour, be sure to spoon and level the measuring cups so you aren’t adding in too much or too little flour. Too much flour and you’ll get dense cupcakes and too little flour and these cupcakes will likely sink and be too wet.
  • Stir everything until just combined. If you overmix the ingredients, you’ll end up with dense cupcakes.

Process shots-- images of the wet and dry ingredients being combined and mixed together and then added to a prepared muffin pan to bake

How to know when these Carrot Cake Cupcakes are done

  • Visual cues for doneness: Cupcakes are slightly domed and the tops are caramelized in appearance.
  • Physical cue for doneness: A toothpick inserted into the center of the cupcakes comes out clean or with a couple of moist (not wet) crumbs. If you don’t have a toothpick, press down gently on the top of the cupcake, if the cupcake springs back nicely, they are done.

Quick Tip

Number 1 Tip For Success: Grate the carrots by hand! I know, it can be a pain, but this is how we ensure ultra-moist and delicious cupcakes. Pre-shredded carrots in the grocery store are much too large and dry for these cupcakes, and results won’t be the same.

Carrot Cake Cupcakes in the pan

Process shots: making cream cheese frosting

Carrot Cake Cupcakes FAQs

How many calories are in Carrot Cake Cupcakes?

I’ve included a full nutrition breakdown for these cupcakes below the recipe if you’re interested. The total caloric amount for one unfrosted cupcake is 220 calories. This does not include the frosting as that will change depending on how much frosting you use per cupcake. The frosting recipe below makes enough to add a “sky-high” amount of frosting to each cupcake (exactly what is pictured in these photos). If you want less frosting, cut the frosting recipe in half.

How long do you bake mini Carrot Cake Cupcakes?

If you want to make these cupcakes in a miniature muffin tin instead of a regular muffin tin, you’ll want to make sure to still use paper liners and you’ll bake them around 10-15 minutes. Check the cupcakes around 10 minutes. You can test for doneness by sticking a toothpick in the center of a cupcake. If it comes out clean (or with a few moist crumbs) they are done and if it comes out wet you can add a few minutes!

How do you store Carrot Cake Cupcakes?

Truly, these cupcakes (and the frosting) are even better the second day! The flavors from the spices have intensified by day 2, so don’t stress about having to make these the same day as an event!

For any cupcakes that don’t get eaten, store them in an airtight container (or cupcake holder) in the fridge. These cupcakes are best within 3-4 days of being made.

The finished and frosted cupcakes do not freeze and thaw well.

Can I freeze Carrot Cake Cupcakes?

The unfrosted cupcakes freeze beautifully!

Freeze cooled cupcakes on a sheet pan for 1 hour and then transfer to an airtight container or bag for up to a month. Thaw at room temperature or overnight in the fridge before frosting.

Unfortunately, cream cheese frosting doesn’t freeze and thaw well, but you can prepare it a day in advance. Store it in an airtight container in the fridge and set it out to room temperature about 30-45 minutes before you want to frost the cupcakes.

A Carrot Cake Cupcake on a plate

Variations

  • Gluten-Free: Use gluten-free flour instead of regular flour.
  • More Spices: Add more nutmeg, ginger, and cloves for a stronger taste.
  • Nuts or Raisins: Put in some chopped nuts or raisins for extra crunch and sweetness.
  • Pineapple: Mix in some crushed pineapple to make the cake moist and fruity.
  • Coconut: Use some coconut oil and add shredded coconut to give a tropical flavor.
  • Switch Up The Frosting: Add a plain Vanilla Frosting, Vanilla or Chocolate Buttercream Frosting, or a Peanut Butter Frosting

More tasty desserts

4.89 from 18 votes

Carrot Cake Cupcakes

These easy Carrot Cake Cupcakes are flavored with just the right spices and topped with sweet cinnamon-cream cheese frosting. A sprinkle of pecans adds the perfect finishing touch!
Prep Time: 40 minutes
Cook Time: 20 minutes
Total Time: 1 hour
Servings: 12 cupcakes

Equipment

  • Muffin pan lined
  • Mixer

Ingredients 
 

  • 1-1/3 cups flour spooned and leveled
  • 1/2 teaspoon baking soda
  • 1/2 teaspoon baking powder
  • 1/2 teaspoon salt
  • 1-1/4 teaspoon ground cinnamon
  • 1/4 teaspoon ground nutmeg
  • 1/4 teaspoon ground ginger
  • 1/4 teaspoon ground cloves
  • 2/3 cup light brown sugar packed
  • 1/3 cup granulated sugar
  • 2 large eggs
  • 1/4 cup applesauce unsweetened
  • 3/4 teaspoon vanilla bean paste or 1/2 tablespoon vanilla extract
  • 1/2 cup vegetable oil or canola oil
  • 1-1/2 cups finely shredded carrots see note 1

Cream Cheese Frosting

  • 1/2 cup unsalted butter room temperature
  • 1 (8-ounce) package cream cheese room temperature, do not use low fat
  • 1/2 teaspoon vanilla bean paste or 1 teaspoon vanilla extract
  • 1/8 teaspoon salt
  • 1/4 teaspoon ground cinnamon
  • 3 cups powdered sugar
  • 1/2 cup finely chopped pecans optional

Instructions 

  • Preheat oven to 350โ„‰. Line a 12-cavity muffin pan with cupcake liners and set aside. Set out the cream cheese and butter to get to room temperature.
  • In a medium bowl, whisk together flour, baking soda, baking powder, salt, cinnamon, nutmeg, ginger, and cloves. Set aside.
  • In a separate large mixing bowl, use a mixer to beat together the brown sugar, granulated sugar, and eggs until combined. Mix in applesauce and vanilla extract. With the mixer running at low speed, slowly pour in vegetable oil and mix until combined. Finely shred the carrots on the small side of your grater and measure to ensure you have 1-1/2 cups. Add the dry ingredients right on top of the wet ingredients and the shredded carrots right on top of that. Stir until just combined, be careful to not overmix.
  • Pour batter into the prepared muffin cups, filling each cup about 3/4 full. You should use all of the batter between the 12 cavities. Bake in preheated oven for about 18โ€“22 minutes or until a toothpick inserted into the center of the cupcake comes out clean. Cool in the muffin tin for several minutes; transfer to a wire rack and cool completely.

Frosting

  • Using a hand mixer, cream together the room temperature butter and cream cheese on medium-high speed until completely smooth. Mix in vanilla extract, salt, and cinnamon. With mixer running on low speed, slowly add powdered sugar and beat until well blended and smooth. If you'd like a thicker frosting, add a bit more powdered sugar (see note 2). Chill the frosting while the cupcakes finish cooling.
  • Frost completely cooled cupcakes with cream cheese frosting and if desired, sprinkle crushed pecans on top.

Video

Recipe Notes

Note 1: Shredding carrots by hand can be a pain, but youโ€™ll be amazed at how much moisture you get. Pre-shredded carrots in the grocery store are much too large and dry for these cupcakes and the results won't be the same.
Note 2: This makes a lot of frosting, enough for each cupcake to have as much frosting as pictured in these photos. If you'd like less frosting, you can halve the recipe.
Storage: Store cupcakes in the fridge, tightly wrapped with plastic wrap, or in a cupcake holder for up to 4 days. The finished and frosted cupcakes don't freeze and thaw well, but you can freeze unfrosted cupcakes.

Nutrition

Serving: 1serving | Calories: 286kcal | Carbohydrates: 30.5g | Protein: 2.7g | Fat: 17.7g | Cholesterol: 51.3mg | Sodium: 27.8mg | Fiber: 0.9g | Sugar: 18.9g

Nutrition information is automatically calculated, so should only be used as an approximation.

 

Meet Chelsea


Hello, and welcome to Chelseaโ€™s Messy Apron! Iโ€™m Chelsea, the recipe developer, food photographer, and writer behind the site. Iโ€™m passionate about creating simple, reliable, and delicious recipes that anyone can make.

Thanks for stopping byโ€”I hope you find something delicious to make!

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4.89 from 18 votes (4 ratings without comment)

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72 Comments

  1. Janene says:

    5 stars
    Chelsea!! Thankyou for sharing this recipe!! They are just delicious! made them today, impressed everyone!!
    Super yummy!! ?

    1. Chelsea Lords says:

      So happy to hear it! ๐Ÿ™‚ Thanks so much for the comment and review Janene ๐Ÿ™‚

  2. Katie says:

    Hello! I am making these cupcakes for a wedding. How would you recommend storing them until tomorrow while still maintaining freshness?

    1. Chelsea Lords says:

      Do you have a cupcake holder? Otherwise I’d do an airtight container in the fridge!

  3. Shahana says:

    WHat can I substitute for applesauce.? I need it urgent!!! Tomorrow isnโ€™t my girlโ€™s bday!!

    1. Chelsea Lords says:

      I haven’t tried anything in place of the applesauce so I can’t say for sure. I think vegetable oil would substitute in nicely

  4. Spencer says:

    Can pineapples be added or substituted for another ingredient?

    1. Chelsea Lords says:

      I’m sure pineapple could work in these, but I really couldn’t say for sure how it would work or how much without personally testing through the recipe ๐Ÿ™‚

  5. JORDAN ROLSTON says:

    5 stars
    I love this recipe! and so did my family, but I’m just wondering if i can double everything to make 24 cupcakes, with the same results?

    1. Chelsea Lords says:

      So happy to hear it! ๐Ÿ™‚ Although I haven’t personally tried, I don’t see why not ๐Ÿ™‚

  6. Megan says:

    Made these for my daughterโ€™s birthday. Delicious! Very moist and the icing was great. Thanks for sharing.

    1. chelseamessyapron says:

      So happy you liked these, thanks Megan! ๐Ÿ™‚ Happy birthday to your daughter!

  7. Amy says:

    What size cupcake pan are you using? They don’t appear to be miniature 1 in, so out of three typical commercial sized pans would you say the middle size? Thanks!

    1. chelseamessyapron says:

      Yes the medium size! Thanks! ๐Ÿ™‚

  8. Jamie says:

    Hi! In terms of storage for using the next day I want them nice and moist.. so do I store the cupcakes out of the fridge and pipe the icing right before serving?
    Thank you!

    1. chelseamessyapron says:

      That’s what I would do! ๐Ÿ™‚ Make sure they are tightly covered/wrapped up and add frosting right before serving! Enjoy ๐Ÿ™‚

  9. Shannen says:

    4 stars
    I tried these – cupcakes came out great but my icing was very runny, I followed the recipe and even added a bit extra icing but it just ran off the cake. What could I have done wrong?

    1. chelseamessyapron says:

      Hey Shannen; did you by chance melt the butter or cream cheese at all? And you for sure had the right amount of both?

  10. Andreea says:

    I want to try these, but I am not sure I can find cream cheese. Mascarpone would work?