These Quinoa Fajitas are probably unlike any fajitas you’ve ever tried! The filling is made up of loads of veggies, shredded chicken, and quinoa! Dump everything into a slow cooker and forget about it until dinner time. Once everything is cooked, shred the chicken and layer the filling into warmed tortillas. Add your favorite fajita toppings like cheese, sour cream, cilantro, and fresh lime juice.

Overhead image of Quinoa Fajitas in tortillas, ready to be served.

Quinoa Fajitas

The aim of this recipe is to deliver a nutrition-packed, ultra-flavorful meal that can be prepared in no time at all! In my experience, it’s pretty hard to find a quick slow cooker meal that’s also nutritious. Instead of dumping in cans of condensed soup, we’re adding in some fresh, some frozen, and some canned veggies. Now before you say that quick and slow cooker are mutually exclusive, what I’m talking about is the prep time. If you can throw it all in and go, in my book, that’s quick.

This meal is also very easily made vegetarian and while it may seem there’s not a whole lot of protein in these quinoa fajitas, they’re actually packed with protein. Both black beans and quinoa are excellent sources of plant-based protein. If vegetarian is not your aim, then go ahead and pair this recipe with chicken for some protein-packed fajitas that are ultra-satiating!

Quick Tip

Typically the more protein in a dish, the more satiating it is. This means you’ll be fuller for longer and more protein helps to curb cravings among other things.

Process shots-- images of all the ingredients being added to the slow cooker.

Quinoa Fajitas Shortcut Tips

  • To ensure the prep for this dish is as quick as possible, we minimize the number of fresh veggies required. So while there aren’t any onions or garlic in this dish, we add garlic and onion powder instead. (Feel free to add in garlic and onion if you prefer; I’d sauté them first since they might not soften enough in the slow cooker.)
  • Buy pre-chopped butternut squash or sweet potatoes to save prep time. A lot of stores sell these ready-chopped veggies in the produce section of the store.
  • Look for frozen, thinly sliced peppers (usually in a package with onions) instead of thinly slicing fresh peppers. Again, you’ll find these in the produce section and also in the freezer aisle.
  • Add fire-roasted tomatoes. This type of tomato is charred over a flame before being crushed and canned. Contact with that flame brings out the tomato’s sweetness and gives a distinct smoky flavor. Essentially, you’re getting more flavor without any extra work.
  • Use a fajita seasoning mix. Instead of measuring out individual spices, you can use a packet instead. If opting for the packet, I recommend getting a good quality brand to ensure these Quinoa Fajitas have enough flavor.

Homemade fajita seasoning

Instead of using a packet of fajita seasoning, here is a recipe for a homemade blend (the yield is the same quantity as 1 packet). While packets are the quickest, if you have the time, homemade tastes the best, is more economical, and you know exactly what’s in it. This is important if you’re concerned about additives, gluten, or animal products.

  • 2 teaspoons ground chili powder (use McCormick® for less heat)
  • 1 teaspoon EACH: paprika, fine sea salt, white granulated sugar, ground cumin
  • 1/2 teaspoon EACH: onion powder, garlic powder
  • 1/8 teaspoon: ground cayenne pepper (increase or decrease depending on heat preference)

Quick Tip

While you’re at it, make up several batches of this fajita seasoning blend. Package them in individual serving-sized packages and store them in the pantry. They’ll be just as easy to use as the store-bought mixes!

Process shots-- images of the tortillas being charred and then stuffed with the Quinoa Fajita filling.

Quinoa Fajita Notes

  • Cut the sweet potatoes into even and small (1/2-inch) cubes. If the potato pieces are too large, they won’t get tender in time.
  • Cook on high. This recipe doesn’t cook well on the low setting. The quinoa needs higher heat to “pop” and cook through. 
  • Generously grease the slow cooker or use a liner. Quinoa tends to stick to the bottom of the pot.
  • Use good-quality vegetable or chicken stock. I highly recommend Swanson’s® vegetable or chicken stock (not sponsored) which I’ve found to have the most robust flavor for a store-bought stock.
  • Make vegan/vegetarian. Replace the chicken broth/stock with vegetable stock/broth and leave out the chicken (no other changes necessary). For toppings, stick to vegan alternatives if vegan.

Topping Suggestions

These Quinoa Fajitas are delicious, but the toppings really seal the deal. Our “must-have” toppings include extra-sharp Cheddar cheese, fresh lime, and a thinly sliced avocado. Here are some other ideas:

  1. Cotija cheese
  2. Chopped cherry tomatoes 
  3. Fresh-chopped cilantro or thinly sliced green onions
  4. A squeeze of fresh lime
  5. A large scoop of sour cream (we use fat-free to keep these on the light side); you can also use Greek yogurt.
  6. Sliced avocado or scoop of guacamole
  7. Pickled red onions (I share a quick pickled red onion recipe on these chicken tinga tacos)

Up-close image of the Quinoa Fajitas with all the toppings.

More quinoa recipes

5 from 6 votes

Quinoa Fajitas

These Quinoa Fajitas are a fun twist on the classic! Toss veggies, chicken, and quinoa in the slow cooker and let it work its magic. Just shred the chicken, layer into warm tortillas, and top with cheese, sour cream, cilantro, and lime for an easy, tasty dinner.
Prep Time: 30 minutes
Cook Time: 4 hours
Total Time: 4 hours 30 minutes
Servings: 6 servings

Equipment

  • Crock-Pot 6-quart, see note 1

Ingredients 
 

  • Cooking spray
  • 1 cup uncooked quinoa
  • 3/4 pound (11 ounces) boneless, skinless chicken thighs or breasts, optional, see note 2
  • 1-1/2 cups frozen corn or 1 can corn
  • 1 (15.25-ounce) can black beans drained and rinsed
  • 2 (14.5-ounce) cans fire-roasted crushed tomatoes undrained
  • 1 cup chicken stock or broth or vegetable broth
  • 2 cups sweet potatoes peeled and chopped into 1/2-inch pieces
  • 1-1/2 cups thinly sliced sweet bell peppers I use 1/2 an orange pepper and 1/2 of a red one
  • 1 fajita seasoning mix see note 2
  • Tortillas flour or corn
  • Toppings as desired see note 3

Instructions 

  • Thoroughly rinse the quinoa in a fine-mesh sieve. Drain and rinse black beans. Peel and dice the sweet potato (small pieces to cook in time!). Thinly slice the pepper(s) and cut the long pepper strips in half lengthwise.
  • Generously spray the slow cooker with cooking spray or insert a liner. Combine quinoa, chicken (see note 1; be sure to cut each breast into 4โ€“5 even pieces and each thigh into 3โ€“4 even pieces), corn, black beans, crushed tomatoes, chicken stock, sweet potatoes, and peppers in the slow cooker. Add fajita seasoning mix or seasonings listed in note 3. Gently stir everything together and submerge the chicken below everything else.
  • Cook 3-1/2 to 4 hours on high, watching carefully so the quinoa doesnโ€™t burn (avoid opening the slow cooker and checkingโ€”this disrupts the heating). I donโ€™t recommend cooking on low; the quinoa gets too mushy. Cook until the chicken shreds and the quinoa has popped. Remove chicken and thinly slice or shred with two forks. Gently stir everything together and taste for seasonings, adding salt and pepper as needed.
  • Spoon filling into charred or warmed (see note 3) tortillas and top with optional toppings. For me, fresh lime, fresh cilantro, sour cream, and Cheddar cheese are must-have toppings!

Recipe Notes

Note 1: I tested this recipe in a pressure cooker/Instant Pot; it was too mushy, and the chicken was undercooked. Iโ€™d stick with a slow cooker for this recipe!
Note 2: Iโ€™ve found thighs remain the most tender, but breasts can be used. Cut thighs or breasts into smaller pieces before adding to the slow cooker so they cook through in time. For a vegetarian meal, leave out chicken and use vegetable stock/broth. Make this recipe vegan by following the previous suggestions and using non-dairy toppings.
Note 3: Make your own fajita seasoning mix! Hereโ€™s the blend to use instead of a packet:
  • 2 teaspoons ground chili powder (use McCormick for less heat)
  • 1 teaspoon each: paprika, fine sea salt, granulated sugar, ground cumin
  • 1/2 teaspoon each: onion powder, garlic powder
  • 1/8 teaspoon: ground cayenne pepper (increase or decrease depending on heat preference)
You can make this recipe in bulk and put in individual-serving packets. Scoop out 1 tablespoon for each packet.
Note 4: Toppings: shredded sharp Cheddar cheese, low-fat sour cream, cilantro, fresh lime, chopped avocado or guacamole, and/or cherry tomatoes.
Note 5: Hereโ€™s how I char the tortillas (optional):
  1. Spray both sides of the tortillas with cooking spray. I use an olive oil-based spray (canola works as well).
  2. Very lightly charย eachย side of the tortilla over an open flame on the stovetop. If you donโ€™t have an open flame, warm for 10โ€“15 seconds in a skillet.
  3. Immediately remove the tortilla from the heat and fold in half. Place under a towel and repeat until all tortillas are charred.
Nutrition Note: Nutritional information was calculated using corn tortillas.
Storage: Store leftovers in an airtight container in the fridge for up to 3 days. Keep tortillas separate to avoid sogginess. Reheat the filling and assemble when ready to eat.

Nutrition

Serving: 1serving | Calories: 587kcal | Carbohydrates: 103g | Protein: 32g | Fat: 8g | Saturated Fat: 1g | Trans Fat: 1g | Cholesterol: 55mg | Sodium: 355mg | Potassium: 1693mg | Fiber: 19g | Sugar: 13g | Vitamin A: 13363IU | Vitamin C: 94mg | Calcium: 149mg | Iron: 7mg

Nutrition information is automatically calculated, so should only be used as an approximation.

 

Meet Chelsea


Hello, and welcome to Chelseaโ€™s Messy Apron! Iโ€™m Chelsea, the recipe developer, food photographer, and writer behind the site. Iโ€™m passionate about creating simple, reliable, and delicious recipes that anyone can make.

Thanks for stopping byโ€”I hope you find something delicious to make!

More Recipes You'll Love

5 from 6 votes (2 ratings without comment)

Leave a comment

Your email address will not be published. Required fields are marked *

Recipe Rating




48 Comments

  1. Sb says:

    Is it freezer friendly?

  2. Jessica says:

    I am wondering if you have ever made this in an instant pot? I have made it before and love it but wonโ€™t have enough time to make it in crock pot.

    1. chelseamessyapron says:

      I’ve never made it in the instant pot, but it should be just fine if you cook it in there (I believe a few other readers have tried this; so hopefully someone can chime in here with better directions!) Let me know how you like it! ๐Ÿ™‚

  3. Ally says:

    hi! I’ve never used my 2qt crock pot before and I don’t see if this recipe is for a 2qt crock pot or a larger one. Can you please clarify?

    1. chelseamessyapron says:

      I use a 6 quart crockpot. I think for a 2 quart you’ll need to halve this recipe!

  4. Alicia says:

    Oh man, I just made this with a few tweaks…Ah-mazing!!!

    1. chelseamessyapron says:

      Yay!! So glad to hear you enjoyed these! ๐Ÿ™‚

  5. Paige says:

    Just wondering, I have a ton of butternut squash to use up. Do you think it would be okay to use the squash in lieu of the sweet potatoes? Thanks!

    1. chelseamessyapron says:

      Yep that should work out great! ๐Ÿ™‚

      1. Paige says:

        Thank you, added to the menu plan!